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bootscan analysis simplot version 3.5.1  (Simplot Science)

 
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    Simplot Science bootscan analysis simplot version 3.5.1
    Bootscan Analysis Simplot Version 3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/simplot+bootscan+analysis/bootscan+analysis+simplot+version+3+5+1/pm40100842-229-0-5
    Average 90 stars, based on 1 article reviews
    bootscan analysis simplot version 3.5.1 - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Stripping Membranes:

    Article Title: Near Full-Length Genomic Characterization of a Novel CRF 01_AE/C Recombinant from Western India.
    Article Snippet: HIV is known for its genetic variability across the globe.. The HIV epidemic in India is primarily driven by subtype C, although sporadic circulating and unique recombinant forms are also reported from a few metropolitan cities in which genotyping facilities are available.. Here we report a novel CRF01_AE/C recombinant from a multicenter study on the effectiveness of antiretroviral therapy (ART), 12 months after its initiation.

    other:

    Article Title: Hepatitis B Virus (HBV) X Gene Diversity and Evidence of Recombination in HBV/HIV Co-Infected Persons
    Article Snippet: SimPlot bootscan analysis confirmed recombination breakpoints within the X gene in both individuals.

    Article Title: Sequencing and Phylogenetic Analysis of Near Full-Length HIV-1 Subtypes A, B, G and Unique Recombinant AC and AD Viral Strains Identified in South Africa
    Article Snippet: SimPlot bootscan analysis identified TV101 as an A1/D recombinant and TV218 as an A1/C recombinant.

    Sequencing:

    Article Title: Genetic characterizations and molecular epidemiology of human echovirus 30 isolated from Ningxia, China
    Article Snippet: .. The whole genome Simplot BootScan analysis was conducted with the query sequence of NX2017E30 strain. ..

    Article Title: Characterization of a New HIV-1 CRF01_AE/CRF07_BC Recombinant Virus in Guangxi, China
    Article Snippet: Desheng Kong, Yan Wang, Chen Wang, Shujia Liang, Yi Feng, Yuhua Ruan, Yiming Shao and Liying Ma 1.. State Key Laboratory of Infectious Disease Prevention and Control, National Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, People’s Republic of China.. Clinical and Research Center of Infectious Diseases, Beijing Ditan Hospital, Capital Medical University, Beijing, People’s Republic of China.



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    Image Search Results


    Similarity plot analysis comparing strain Ningxia echovirus 30 (E30) with enterovirus B (EV-B) strains, based on the full-length genomes. The 2017 E30 strains were used independently as query sequences. The nucleotide sequence of each strain was compared with those of strains of EV-B, using Simplot software version 3.5.1, with a sliding window of 200 nucleotides moving in steps of 20. Colored lines indicate the strains described in this article, and other strains are indicated by gray lines. The whole genome Simplot BootScan analysis was conducted with the query sequence of NX2017E30 strain. A) The enterovirus genomic organization is shown at the top. B) Similarity plot analysis. C) Bootscanning analysis on the putative recombinant strain and its parental sequences.

    Journal: Biosafety and Health

    Article Title: Genetic characterizations and molecular epidemiology of human echovirus 30 isolated from Ningxia, China

    doi: 10.1016/j.bsheal.2023.10.001

    Figure Lengend Snippet: Similarity plot analysis comparing strain Ningxia echovirus 30 (E30) with enterovirus B (EV-B) strains, based on the full-length genomes. The 2017 E30 strains were used independently as query sequences. The nucleotide sequence of each strain was compared with those of strains of EV-B, using Simplot software version 3.5.1, with a sliding window of 200 nucleotides moving in steps of 20. Colored lines indicate the strains described in this article, and other strains are indicated by gray lines. The whole genome Simplot BootScan analysis was conducted with the query sequence of NX2017E30 strain. A) The enterovirus genomic organization is shown at the top. B) Similarity plot analysis. C) Bootscanning analysis on the putative recombinant strain and its parental sequences.

    Article Snippet: The whole genome Simplot BootScan analysis was conducted with the query sequence of NX2017E30 strain.

    Techniques: Sequencing, Software, Recombinant